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The spatial distribution and semi-quantitative abundance of a total of 238 taxa were assessed at 49 wave-exposed locations. These data provide a comprehensive baseline against which biodiversity changes can be effectively and objectively evaluated. This study provides a description of the rocky shore intertidal biodiversity of the mainland Portuguese coast in the early 2000s. The spatial distribution and semi-quantitative abundance of a total of 238 taxa were assessed at 49 wave-exposed locations. These data provide a comprehensive base