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Globally, seagrass habitats are decreasing due to both natural and environmental contaminations by human activities, including heavy metal pollution. To expand the global seagrass detection network, this study reports the spatial distributions of Zostera japonica seagrass habitats in the Yellow River Estuary, China. In addition, heavy metal concentrations of Z. japonica tissue, sediment, and surface seawater were analyzed to determine the bioaccumulation and consequent ecological risk to Z. japonica habitats due to the effects of heavy