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Certain genotypes either contain active transposable elements or are more permissive of transposition and accumulate copies of particular transposable elements. Overall, it is important to quantify genotype-specific transposable element dynamics as well as population averages to understand the dynamics of transposable element accumulation over time. © 2020 The Authors. Ecology and Evolution published by John Wiley Sons Ltd.Bushmeat hunting has reduced population sizes of large frugivorous vertebrates throughout the tropics, thereby