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Seagrass habitats at the Cocos (Keeling) Islands (CKI), a remote atoll in the Indian Ocean, have suffered a catastrophic decline over the last decade. Seagrass monitoring (1996-202 in relation to dredging and coastal development works (2009 to 2011) provide a historical baseline, and document the decline of mixed tropical seagrass Thalassia hemprichii and macroalgal (predominantly Caulerpa spp.) beds over a decadal scale time series. Attribution of loss to coastal development is confounded by lagoon-wide die-off events in 2007, 2009 and